Resistance to antibiotics in northern nigeria: what bacteria are prevalent, and which drugs work against them

Antimicrobial resistance – the ability of microorganisms to resist drugs that have been developed to control them – is a severe problem in African countries. The continent has the highest

global burden of antimicrobial-resistant infections, with 114.8 deaths per 100,000 people. One of the causes of resistance is inappropriate use of antibiotics. Using the wrong antibiotic to

treat an infection enables resistant bacteria to flourish and spread. It’s challenging to address the resistance problem when there are gaps in three areas: * access to effective

antimicrobial agents * laboratory capacity to identify the source of infections * funding to carry out planned solutions. It’s essential to identify the type of infection present so that the

right antimicrobial agent can be selected. Treatment guidelines stress the importance of using laboratory data to guide treatment. Physicians need laboratory data to choose the right

antibiotic, at the right dose, for the right period of time. This is known as antimicrobial stewardship. But in low- and middle-income countries, hospital budgets don’t include much funding

for laboratories. So laboratory data to create local treatment guidelines for doctors are scarce. Treatment choices become “empiric” – the doctor’s best guess based on the patient’s signs

and symptoms and the doctor’s experience. This can lead to choosing ineffective antibiotics, which can lead to increases in resistant bacteria. Our combined experience in understanding and

addressing the spread of antimicrobial resistant organisms in African countries, and Nigeria in particular, spans 40 years. Over this time, we have noted how the lack of laboratory data

hinders the effective treatment of patients with infections. We have also observed that the cost of producing quality laboratory data is high and rising. ------------------------- _ READ

MORE: HEALTH SYSTEM INEQUALITIES IN EAST AFRICA DRIVE ANTIMICROBIAL RESISTANCE _ ------------------------- One way forward is to pool laboratory data from other hospitals in the region to

guide therapeutic choices. In other words, to develop a list of what bacteria are prevalent in the region and which drugs work against them. To accomplish this, we recently conducted a study

of multidrug-resistant bacteria obtained from patients in six hospitals in northern Nigeria. Our goal was to determine which antimicrobial agents might still be effective therapies in this

region. The results indicate that the mechanisms by which bacteria have become resistant in the region are complex. But there may be ways to support antimicrobial stewardship efforts in

local hospitals. DRUG-RESISTANT BACTERIA IN NIGERIA We chose to analyse bacteria that are resistant to more than one drug because they are the biggest challenge when treating infections. We

focused primarily on bacteria from blood and urinary tract infections. We found that about 85% of the bacteria isolated from infections were resistant to the most commonly used antibiotics.

So, without laboratory data, the most frequent choices of antibiotics would probably be ineffective. In addition, 65% of the bacteria analysed were resistant to the “antibiotics of last

resort”. Those are antibiotics reserved for treating the most difficult infections. This result was higher than anticipated. It underscored the need for laboratory data to indicate where

antibiotic resistance was becoming a serious problem. The good news was that two antibiotics, tigecycline and fosfomycin, remained very active even against highly resistant strains of

bacteria. The bad news was that these antibiotics are expensive and not readily available in many hospitals in Africa. Nevertheless, this data on the resistance patterns of multidrug

resistant infections supports the value of regional guidelines. It points to strategies of antimicrobial stewardship that might work specifically in Nigeria. Such strategies could include

judicious use of tigecycline or fosfomycin for serious infections when guided by laboratory data. GENETIC MECHANISMS Our study went beyond the use of routine testing methods and included

whole genome sequencing of the resistant bacteria. This was done to understand what made these organisms so resistant to antibiotics at the molecular level. The data revealed an

astonishingly high number of genetic mechanisms making the microorganisms resistant. This shows that the choice of agents to treat infections has not been optimal in the past. Genes which

inactivated some classes of antimicrobial agents such as beta-lactams, aminoglycosides, tetracyclines and fluoroquinolones were present. In some cases, the genetic information encoding

resistance was capable of being shared among other microorganisms. This increases the potential for spread of the resistance problem. Additionally, among the isolates studied, several

belonged to newly emerging “high-risk” bacterial clones. These are bacterial species of high virulence that are easily spread among patient populations. Hospitals need to pay closer

attention to infections caused by resistant bacteria to ensure infections do not spread to other patients. THE NEED FOR ANTIMICROBIAL STEWARDSHIP Some of the resistance genes were capable of

moving from one microorganism to another (mobile resistance genes). Other genes were embedded within the bacterial chromosome. Unlike the mobile genes, which can be unstable and lost, the

ones in the chromosome are often stable. This mix of mobile and embedded resistance genes suggests that resistance will not go away any time soon. However, there is hope for decreasing the

impact of resistance through effective antibiotic prescribing. Antimicrobial stewardship based on laboratory data is effective especially if done locally, regionally and nationally.

ANTIMICROBIAL RESISTANCE IS EVERYONE’S CONCERN Four points are important for the public to note. First, similar multidrug-resistant strains of bacteria have been detected in the United

States, Europe, Asia and Australia. This is a global issue. Second, the data could have been much worse. We did identify antibiotics that are still effective even against the most resistant

bacterial strains we studied. Third, there are efforts in place in Nigeria and other African countries to limit the spread of resistant microorganisms. ------------------------- _ READ MORE:

ANTIMICROBIAL RESISTANCE CALLS FOR BRAINPOWER OF A SPACE AGENCY AND CAMPAIGNING ZEAL OF AN NGO _ ------------------------- Fourth, there are things that everyone can do to help bring

antibiotic resistance under control. For example, the US Centers for Disease Control and Prevention list five things that everyone should know about drug resistance and 10 activities to

protect yourself and your family against resistance. This is a global battle that we need to win.