Seeing the full picture of metabolism
Seeing the full picture of metabolism"
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Access through your institution Buy or subscribe Cells, tissues and organisms contain complex mixtures of chemicals, the products and by-products of metabolism. Although mass spectrometry
was routinely used to identify specific classes of metabolites starting in the mid-1950s (Milestone 7), it would take another decade before researchers began using the technique to examine
complex metabolite mixtures. In one early example, E.C. Horning and colleagues separated and characterized organic compounds from urine, mainly acids and steroids, using gas-liquid
chromatography and confirming chemical identity by mass spectrometry. In 1971, they extended their analysis to include drugs and drug metabolites, initiating the use of the method as a means
of establishing a 'metabolic profile' of an individual. This is a preview of subscription content, access via your institution ACCESS OPTIONS Access through your institution
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Contact customer support REFERENCES ORIGINAL RESEARCH PAPERS * Dalgliesh, C.E., Horning, E.C., Horning, M.G., Knox, K.L. & Yarger, K. Gas-liquid-chromatographic procedure for separating
a wide range of metabolites occurring in urine or tissue extracts. _Biochem. J._ 101, 792–810 (1966) Article CAS Google Scholar * Horning, E.C. & Horning, M.G. Metabolic profiles:
gas-phase methods for analysis of metabolites. _Clin. Chem._ 17, 802–809 (1971) CAS PubMed Google Scholar * Han, X. & Gross, R.W. Electrospray ionization mass spectroscopic analysis
of human erythrocyte plasma membrane phospholipids. _Proc. Natl. Acad. Sci. USA_ 91, 10635–10639 (1994) Article CAS Google Scholar * Brügger, B., Erben, G., Sandhoff, R., Wieland, F.T.
& Lehmann, W.D. Quantitative analysis of biological membrane lipids at the low picomole level by nano-electrospray ionization tandem mass spectrometry. _Proc. Natl. Acad. Sci. USA_ 94,
2339–2344 (1997) Article Google Scholar * Fiehn, O. et al. Metabolite profiling for plant functional genomics. _Nat. Biotechnol._ 18, 1157–1161 (2000) Article CAS Google Scholar *
Buchholz, A., Hurlebaus, J., Wandrey, C. & Takors, R. Metabolomics: quantification of intracellular metabolite dynamics. _Biomol. Eng._ 19, 5–15 (2002) Article CAS Google Scholar
FURTHER READING * McFadden, W.H., Teranishi, R., Corse, J., Black, D.R. & Mon, T.R. Volatiles from strawberries. II. Combined mass spectrometry and gas chromatography on complex
mixtures. _J. Chromatogr._ 18, 10–19 (1965) Article CAS Google Scholar * Allen, J. et al. _High-throughput classification of yeast mutants for functional genomics using metabolic
footprinting._ _Nat. Biotechnol._ 21, 692–696 (2003)10.1038/nbt823 Article CAS Google Scholar * Fischer, E. & Sauer, U. Metabolic flux profiling of _Escherichia coli_ mutants in
central carbon metabolism using GC-MS. _Eur. J. Biochem._ 270, 880–891 (2003) Article CAS Google Scholar * Smith, C.A., Want, E.J., O'Maille, G., Abagyan, R. & Siuzdak, G. XCMS:
processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification. _Anal. Chem._ 78, 779–787 (2006) Article CAS Google Scholar
Download references AUTHOR INFORMATION AUTHORS AND AFFILIATIONS * Associate Editor, Nature Communications, Kyle Legate Authors * Kyle Legate View author publications You can also search for
this author inPubMed Google Scholar RIGHTS AND PERMISSIONS Reprints and permissions ABOUT THIS ARTICLE CITE THIS ARTICLE Legate, K. Seeing the full picture of metabolism. _Nat Methods_ 12
(Suppl 1), 14 (2015). https://doi.org/10.1038/nmeth.3529 Download citation * Published: 10 September 2015 * Issue Date: October 2015 * DOI: https://doi.org/10.1038/nmeth.3529 SHARE THIS
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